1. Gene
  2. LIN28B - lin-28 homolog B Gene

LIN28B - lin-28 homolog B Gene

中文名称:lin-28 同系物 B

种属: Homo sapiens

同用名: CSDD2

基因 ID: 389421 | 基因类型: protein coding

关于 LIN28B

Cytogenetic location: 6q16.3-q21 Genomic coordinates (GRCh38): 6:104,937,026-105,083,332 (from NCBI)

This gene has 3 transcripts (splice variants), 231 orthologues, 4 paralogues and is associated with 1 phenotype. Restricted expression toward placenta (RPKM 24.7).

功能概要

该基因编码的蛋白属于 lin-28 家族,其特征是存在冷休克结构域和一对 CCHC 锌指结构域。该基因在睾丸、胎儿肝脏、胎盘以及原发性人类肿瘤和癌细胞系中高度表达。它受到靶向 3' UTR 位点的 MicroRNA 的负调控,并且该基因在原发性肿瘤中的过表达与 let-7 MicroRNA 家族的抑制和 let-7 靶标的去阻遏有关,从而促进细胞转化。[RefSeq 提供,2012 年 6 月]

The protein encoded by this gene belongs to the lin-28 family, which is characterized by the presence of a cold-shock domain and a pair of CCHC zinc finger domains. This gene is highly expressed in testis, fetal liver, placenta, and in primary human tumors and Cancer cell lines. It is negatively regulated by MicroRNAs that target sites in the 3' UTR, and overexpression of this gene in primary tumors is linked to the repression of let-7 family of MicroRNAs and derepression of let-7 targets, which facilitates cellular transformation. [provided by RefSeq, Jun 2012]

LIN28B 基因产物(2)

mRNA Protein Name
NM_001004317.4 NP_001004317.1 protein lin-28 homolog B isoform 1
NM_001410939.1 NP_001397868.1 protein lin-28 homolog B isoform 2
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IDA
IDA: 通过直接分析推断
19703396 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
19703396 GOA
enables sequence-specific double-stranded DNA binding IDA
IDA: 通过直接分析推断
28473536 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in RNA 3'-end processing IMP
IMP: 通过突变表型推断
19703396 GOA
involved in RNA destabilization IDA
IDA: 通过直接分析推断
18951094 GOA
involved in miRNA catabolic process IMP
IMP: 通过突变表型推断
19703396 GOA
involved in negative regulation of pre-miRNA processing IDA
IDA: 通过直接分析推断
18951094 GOA
involved in negative regulation of primary miRNA processing IDA
IDA: 通过直接分析推断
18951094 GOA
involved in positive regulation of miRNA catabolic process IMP
IMP: 通过突变表型推断
18951094 GOA
involved in pre-miRNA processing IMP
IMP: 通过突变表型推断
19703396 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

LIN28B 蛋白结构

CSD

CSD: 'Cold-shock' DNA-binding domain (31 - 101)

zf-CCHC

zf-CCHC: Zinc knuckle (128 - 142)

  • 0
  • 100
  • 200
  • 250 a.a.
蛋白主名 其他名称

protein lin-28 homolog B

Lin-28.2

LIN28B 抗体

目录号 产品名 应用 反应物种
HY-P80211 Lin28B Antibody (YA709) WB, ICC/IF, IHC-P Human

关联疾病

疾病名称 别名
Neuroblastoma

Nb

Neuroblastoma, Susceptibility To

Neuroblastomas

Central Neuroblastoma

Acrocephalopolysyndactyly Type Iii

Sakati Syndrome

Sakati-Nyhan Syndrome

Acps With Leg Hypoplasia

Acps Iii

Acrocephalopolysyndactyly Type 3

Sakati-Nyhan-Tisdale Syndrome

Perlman Syndrome

Nephroblastomatosis, Fetal Ascites, Macrosomia And Wilms Tumor

PRLMNS

Renal Hamartomas, Nephroblastomatosis, And Fetal Gigantism

Nephroblastomatosis Fetal Ascites Macrosomia And Wilms Tumor

Nephroblastomatosis, Fetal Ascites, Macrosomia, And Wilms Tumor

Nephroblastomatosis - Fetal Ascites - Macrosomia - Wilms Tumor

Renal Hamartomas, Nephroblastomatosis And Fetal Gigantism

Nephroblastomatosis-Fetal Ascites-Macrosomia-Wilms Tumor Syndrome

Renal Hamartomas Nephroblastomatosis And Fetal Gigantism

Nephroblastoma

Fetal Macrosomia

Central Precocious Puberty

Cpp

Gonadotropin-Dependant Precocious Puberty

Gonadotropin-Dependent Precocious Puberty

Precocious Puberty, Central

Breast Adenocarcinoma

Mammary Adenocarcinoma

Adenocarcinoma Of Breast

Hepatocellular Carcinoma

Liver Cancer

Primary Liver Cancer

HCC

Hepatoma

Malignant Neoplasm Of Liver

Liver Neoplasms

Cancer, Hepatocellular

Liver Cell Carcinoma

Lcc

Hepatoblastoma, Somatic

Hepatic Cancer

Primary Malignant Neoplasm Of Liver

Rare Tumor Of Liver And Intrahepatic Biliary Tract

Hepatocellular Carcinoma, Somatic

Hepatocellular Carcinoma, Childhood Type, Somatic

Hepatocellular Cancer, Somatic

Ca Liver - Primary

Hepatic Neoplasm

Malignant Hepato-Biliary Neoplasm

Malignant Neoplasm Of Liver, Not Specified As Primary Or Secondary

Malignant Neoplasm Of Liver, Primary

Malignant Tumor Of Liver

Neoplasm Of Liver

Non-Resectable Primary Hepatic Malignant Neoplasm

Resectable Malignant Neoplasm Of Liver

Resectable Malignant Neoplasm Of The Liver

Primary Liver Carcinoma

Primary Malignant Liver Neoplasm

Primary Cancer Of Liver

Primary Tumor Of The Liver

Rare Tumor Of Liver And Ibt

Hepatocellular Cancer

Neoplasm Of The Liver

Carcinoma, Hepatocellular

Hepatomas

Liver Neoplasm

Liver Carcinoma

Liver And Intrahepatic Biliary Tract Carcinoma

Malignant Hepatobiliary Neoplasm

Adult Primary Hepatocellular Carcinoma

Hepatoblastoma

Carcinoma Of Liver

Malignant Liver Tumour

Malignant Hepatic Tumour

Atypical Teratoid Rhabdoid Tumor

Rhabdoid Tumor Predisposition Syndrome

Rtps

Atypical Teratoid/Rhabdoid Tumor

Rhabdoid Predisposition Syndrome

Familial Posterior Fossa Brain Tumor Of Infancy

Familial Rhabdoid Tumor

At/Rt

Atypical Teratoid Rhabdoid Tumour

Atypical Teratoid/Rhabdoid Tumour

Rhabdoid Tumor Of The Cns

Rhabdoid Tumour Of The Cns

Familial Posterior Fossa Brain Tumor Syndrome

Hereditary Swi/Snf Deficiency Syndrome

Atrt

Adult Hepatocellular Carcinoma

Adult Primary Hepatocellular Carcinoma

Adult Hepatoma

Adult Hcc

Wilms Tumor 1

Nephroblastoma

Wilms Tumor

WT1

Wilms' Tumor

Bilateral Wilms Tumor

Wilms Tumor, Type 1

Wilms Tumor, Somatic

Adult Nephroblastoma

Wt1 Disorder

Renal Embryonic Tumor

Adult Kidney Wilms Tumor

Childhood Kidney Wilms Tumor

Nonanaplastic Kidney Wilms Tumor

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus LIN28B VGNC VGNC:108131
Canis familiaris LIN28B VGNC VGNC:42684
Felis catus LIN28B VGNC VGNC:102449
Rattus norvegicus LIN28B RGD RGD:1597432
Macaca mulatta LIN28B VGNC VGNC:74175
Mus musculus LIN28B MGD MGI:3584032