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  2. PCDHGA1 - protocadherin gamma subfamily A, 1 Gene

PCDHGA1 - protocadherin gamma subfamily A, 1 Gene

中文名称:原钙粘蛋白伽玛亚科 A,1

种属: Homo sapiens

同用名: PCDH-GAMMA-A1

基因 ID: 56114 | 基因类型: protein coding

关于 PCDHGA1

Cytogenetic location: 5q31.3 Genomic coordinates (GRCh38): 5:141,330,514-141,512,975 (from NCBI)

This gene has 2 transcripts (splice variants), 23 orthologues and 61 paralogues.

功能概要

该基因是原钙粘蛋白伽玛基因簇的成员,原钙粘蛋白伽马基因簇是在 5 号染色体上串联连接的三个相关簇之一。这些基因簇具有免疫球蛋白样组织,表明它们的调控和表达可能涉及一种新机制。伽马基因簇包括 22 个基因,分为 3 个亚家族。亚科 A 包含 12 个基因,亚科 B 包含 7 个基因和 2 个假基因,关系较远的亚科 C 包含 3 个基因。 22 个大型可变区外显子的串联阵列后面是一个恒定区,包含簇中所有基因共享的 3 个外显子。每个可变区外显子编码胞外区,其中包括 6 个钙粘蛋白胞外域和一个跨膜区。恒定区外显子编码共同的细胞质区。这些神经钙粘蛋白样细胞粘附蛋白很可能在大脑中特定细胞间连接的建立和功能中发挥关键作用。选择性剪接已被描述为伽马簇基因。[RefSeq 提供,2008 年 7 月]

This gene is a member of the protocadherin gamma gene cluster, one of three related clusters tandemly linked on chromosome five. These gene clusters have an immunoglobulin-like organization, suggesting that a novel mechanism may be involved in their regulation and expression. The gamma gene cluster includes 22 genes divided into 3 subfamilies. Subfamily A contains 12 genes, subfamily B contains 7 genes and 2 pseudogenes, and the more distantly related subfamily C contains 3 genes. The tandem array of 22 large, variable region exons are followed by a constant region, containing 3 exons shared by all genes in the cluster. Each variable region exon encodes the extracellular region, which includes 6 Cadherin ectodomains and a transmembrane region. The constant region exons encode the common cytoplasmic region. These neural cadherin-like cell adhesion proteins most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been described for the gamma cluster genes. [provided by RefSeq, Jul 2008]

PCDHGA1 基因产物(2)

mRNA Protein Name
NM_018912.3 NP_061735.1 protocadherin gamma-A1 isoform 1 precursor
NM_031993.2 NP_114382.1 protocadherin gamma-A1 isoform 2 precursor

PCDHGA1 蛋白结构

Cadherin_2

Cadherin_2: Cadherin-like (30 - 112)

Cadherin

Cadherin: Cadherin domain (140 - 232)

Cadherin

Cadherin: Cadherin domain (247 - 338)

Cadherin

Cadherin: Cadherin domain (354 - 442)

Cadherin

Cadherin: Cadherin domain (457 - 549)

Cadherin

Cadherin: Cadherin domain (583 - 664)

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  • 931 a.a.
蛋白主名 其他名称

protocadherin gamma-A1

关联疾病

疾病名称 别名
Neurodevelopmental Disorder With Poor Growth And Skeletal Anomalies

NEDGS

Developmental And Epileptic Encephalopathy 9

Efmr

Epileptic Encephalopathy, Early Infantile, 9

Eiee9

DEE9

Juberg-Hellman Syndrome

Epilepsy, Female-Restricted, With Mental Retardation

Developmental And Epileptic Encephalopathy, 9

Early Infantile Epileptic Encephalopathy 9

Early Infantile Female-Limited Epilecptic Encephalopathy

Female Restricted Epilepsy With Mental Retardation

Juberg Hellman Syndrome

Pcdh19-Related Female-Limited Epilepsy

Epilepsy And Intellectual Disability Limited To Females

Epilepsy, Female Restricted, With Intellectual Disability

Familial Epilepsy And Intellectual Disability Limited To Females

Female Restricted Epilepsy With Intellectual Delays

Pcdh19-Related Fle

Pcdh19-Related Infantile Epileptic Encephalopathy

Female Restricted Epilepsy With Intellectual Disability

Encephalopathy, Epileptic, Early Infantile, Type 9

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus PCDHGA1 MGD MGI:1935212
Rattus norvegicus PCDHGA1 RGD RGD:1590761