1. Gene
  2. COL16A1 - collagen type XVI alpha 1 chain Gene

COL16A1 - collagen type XVI alpha 1 chain Gene

中文名称:XVI 型胶原蛋白 alpha 1 链

种属: Homo sapiens

同用名: 447AA; FP1572

基因 ID: 1307 | 基因类型: protein coding

关于 COL16A1

Cytogenetic location: 1p35.2 Genomic coordinates (GRCh38): 1:31,652,263-31,704,017 (from NCBI)

This gene has 17 transcripts (splice variants), 104 orthologues and 37 paralogues. Broad expression in ovary (RPKM 53.1), prostate (RPKM 25.7) and 20 other tissues.

功能概要

该基因编码 XVI 型胶原蛋白的 α 链,它是 FACIT 胶原蛋白家族的成员 (具有间断螺旋的原纤维相关胶原蛋白) 。该胶原蛋白家族的成员被发现与形成纤维的胶原蛋白如 I 型和 II 型相关,并用于维持细胞外基质的完整性。在成纤维细胞和角质形成细胞以及平滑肌和羊膜中发现了高水平的 XVI 型胶原蛋白。[RefSeq 提供,2008 年 7 月]

This gene encodes the alpha chain of type XVI collagen, a member of the FACIT collagen family (fibril-associated collagens with interrupted helices). Members of this collagen family are found in association with fibril-forming collagens such as type I and II, and serve to maintain the integrity of the extracellular matrix. High levels of type XVI collagen have been found in fibroblasts and keratinocytes, and in smooth muscle and amnion. [provided by RefSeq, Jul 2008]

COL16A1 基因产物(1)

mRNA Protein Name
NM_001856.4 NP_001847.3 collagen alpha-1(XVI) chain precursor

COL16A1 蛋白结构

Collagen

Collagen: Collagen triple helix repeat (20 copies) (375 - 423)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (573 - 633)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (667 - 721)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (788 - 840)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (888 - 938)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (1018 - 1075)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (1472 - 1524)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (1528 - 1576)

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  • 1604 a.a.
蛋白主名 其他名称

collagen alpha-1(XVI) chain

alpha 1 type XVI collagen

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus COL16A1 RGD RGD:1310982
Mus musculus COL16A1 MGD MGI:1095396
Felis catus COL16A1 VGNC VGNC:80174
Canis familiaris COL16A1 VGNC VGNC:39461
Macaca mulatta COL16A1 VGNC VGNC:71293
Bos taurus COL16A1 VGNC VGNC:27557