1. Gene
  2. RDH5 - retinol dehydrogenase 5 Gene

RDH5 - retinol dehydrogenase 5 Gene

中文名称:视黄醇脱氢酶 5

种属: Homo sapiens

同用名: RDH1; 9cRDH; SDR9C5; HSD17B9

基因 ID: 5959 | 基因类型: protein coding

关于 RDH5

Cytogenetic location: 12q13.2 Genomic coordinates (GRCh38): 12:55,720,393-55,724,705 (from NCBI)

This gene has 11 transcripts (splice variants), 197 orthologues, 25 paralogues and is associated with 4 phenotypes. Biased expression in fat (RPKM 73.0), liver (RPKM 14.5) and 5 other tissues.

功能概要

该基因编码一种属于短链脱氢酶/还原酶 (SDR) 家族的酶。这种视黄醇脱氢酶的作用是催化 11-顺式视黄醛生物合成的最后一步,11-顺式视黄醛是视觉色素的通用发色团。该基因的突变会导致常染色体隐性遗传眼底白斑,这是一种罕见的夜盲症,其特征是视锥细胞和视杆细胞的感光色素再生延迟。可变剪接导致多个转录本变体。该基因与邻近的上游 BLOC1S1 (溶酶体细胞器复合物 1,亚基 1 的生物发生) 基因之间也存在通读转录。[RefSeq 提供,2010 年 12 月]

This gene encodes an enzyme belonging to the short-chain dehydrogenases/reductases (SDR) family. This retinol dehydrogenase functions to catalyze the final step in the biosynthesis of 11-cis retinaldehyde, which is the universal chromophore of visual Pigments. Mutations in this gene cause autosomal recessive fundus albipunctatus, a rare form of night blindness that is characterized by a delay in the regeneration of cone and rod photopigments. Alternative splicing results in multiple transcript variants. Read-through transcription also exists between this gene and the neighboring upstream BLOC1S1 (biogenesis of lysosomal organelles complex-1, subunit 1) gene. [provided by RefSeq, Dec 2010]

RDH5 基因产物(2)

mRNA Protein Name
NM_001199771.3 NP_001186700.1 retinol dehydrogenase 5 precursor
NM_002905.5 NP_002896.2 retinol dehydrogenase 5 precursor
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables all-trans-retinol dehydrogenase (NAD+) activity IDA
IDA: 通过直接分析推断
11675386 GOA
enables androstan-3-alpha,17-beta-diol dehydrogenase activity IDA
IDA: 通过直接分析推断
9931293 GOA
enables androsterone dehydrogenase activity IDA
IDA: 通过直接分析推断
9931293 GOA
enables protein homodimerization activity IDA
IDA: 通过直接分析推断
11675386 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in retinoid metabolic process IDA
IDA: 通过直接分析推断
9931293 GOA
involved in steroid metabolic process IDA
IDA: 通过直接分析推断
9931293 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in endoplasmic reticulum lumen IDA
IDA: 通过直接分析推断
11675386 GOA
located in endoplasmic reticulum membrane IDA
IDA: 通过直接分析推断
11675386 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

RDH5 蛋白结构

adh_short

adh_short: short chain dehydrogenase (31 - 193)

  • 0
  • 100
  • 200
  • 300
  • 318 a.a.
蛋白主名 其他名称

retinol dehydrogenase 5

11-cis RDH

关联疾病

疾病名称 别名
Fundus Albipunctatus

Retinitis Punctata Albescens

Pigmentary Retinal Dystrophy

RPA

Albipunctate Retinal Dystrophy

Lauber'S Disease

FALBI

Fa

Fundus Dystrophy

Retinal Dystrophy

Retinal Dystrophies

Dystrophy, Retinal

Night Blindness

Nyctalopia

Oguchi Disease

Stationary Night Blindness, Oguchi Type

Congenital Stationary Night Blindness, Oguchi Type

Oguchi Syndrome

Oguchis Disease

Congenital Stationary Night Blindness

Night Blindness, Congenital Stationary

Congenital Essential Nyctalopia

Oguchi Disease

Blindness, Night, Stationary, Congenital

Bothnia Retinal Dystrophy

Vasterbotten Dystrophy

BRD

Dystrophy, Retinal, Bothnia

Retinitis Pigmentosa

RP

Rod-Cone Dystrophy

Autosomal Recessive Retinitis Pigmentosa

Non-Syndromic Retinitis Pigmentosa

Pericentral Pigmentary Retinopathy

Pigmentary Retinopathy

Tapetoretinal Degeneration

Rcd

Retinitis Pigmentosa Autosomal Recessive

ARRP

Retinitis Pigmentosa, Autosomal Recessive

Retinitis Pigmentosa 1

Newfoundland Rod-Cone Dystrophy

Newfoundland Cone-Rod Dystrophy

NFRCD

Rod-Cone Dystrophy Newfoundland

Progressive Cone Dystrophy

Cone Dystrophy

Cone Dystrophy Progressive

Cone-Rod Dystrophy 2

Cone-Rod Dystrophy

CORD2

Cone-Rod Retinal Dystrophy

Rcrd2

Cone-Rod Retinal Dystrophy 2

Crd2

Cord

Crd

Retinal Cone-Rod Dystrophy

Cone-Rod Retinal Dystrophy-2

Retinal Cone-Rod Dystrophy 2

Tapetoretinal Degeneration

Cone-Rod Degeneration

Cone Rod Dystrophy

Dystrophy, Cone-Rod

Dystrophy, Cone-Rod, Type 2

Retinitis Pigmentosa

Retinitis Pigmentosa 2

Progressive Cone-Rod Dystrophy

Prolonged Electroretinal Response Suppression

Bradyopsia

PERRS

Cone-Rod Dystrophy 8

CORD8

Cone-Rod Dystrophy 9

CORD9

Dystrophy, Cone-Rod, Type 9

Retinitis Pigmentosa 9

Retinitis Pigmentosa 14

RP14

Retinitis Pigmentosa Juvenile Tulp1-Related

Retinitis Pigmentosa-14

Retinitis Pigmentosa, Type 14

Mitochondrial Dna Depletion Syndrome 11

MTDPS11

Progressive External Ophthalmoplegia-Myopathy-Emaciation Syndrome

Mitochondrial Dna Maintenance Syndrome Due To Mgme1 Deficiency

Peo-Myopathy-Emaciation Syndrome

Mtdna Maintenance Syndrome Due To Mgme1 Deficiency

Mitochondrial Dna Depletion Syndrome, Type 11

Microphthalmia, Syndromic 9

Matthew-Wood Syndrome

Spear Syndrome

Anophthalmia/Microphthalmia And Pulmonary Hypoplasia

Microphthalmia, Isolated, With Coloboma 8

MCOPS9

Anophthalmia, Clinical, With Mild Facial Dysmorphism And Variable Malformations Of The Lung, Heart, And Diaphragm

Pulmonary Hypoplasia-Diaphragmatic Hernia-Anophthalmia-Cardiac Defect

Pdac

Pulmonary Agenesis, Microphthalmia, And Diaphragmatic Defect

Pmd

Syndromic Microphthalmia 9

Anophthalmia-Pulmonary Hypoplasia Syndrome

Clinical Anophthalmia Mild Facial Dysmorphism Lung Heart And Diaphragm Malformations

Pulmonary Agenesis Microphthalmi And Diaphragmatic Defect

Microphthalmia Syndromic 9

Matthew Wood Syndrome

Pdac Syndrome

Pulmonary Hypoplasia-Diaphragmatic Hernia-Anophthalmia-Cardiac Defect Syndrome

Microphthalmia, Isolated, With Coloboma, 8

MCOPCB8

Isolated Colobomatous Microphthalmia 8

Microphthalmia, Syndromic, 9

Anophthalmia With Pulmonary Hypoplasia

Microphthalmia Syndromic, Type 9

Anophthalmia And Pulmonary Hypoplasia

Myopia

Near-Sightedness

Short-Sightedness

Nearsightedness

Nearsighted

Near Vision

Close Sighted

Myopic

Short-Sighted

Near Sighted

Retinal Degeneration

Degeneration Of Retina

Microphthalmia

Microphthalmos

Isolated Anophthalmia-Microphthalmia Syndrome

Isolated Microphthalmia-Anophthalmia-Coloboma

Simple Microphthalmos

Clinical Anophthalmia

Isolated Anophthalmia - Microphthalmia

Isolated Pure Microphthalmia

Mac Spectrum

Microphthalmia-Anophthalmia-Coloboma Spectrum

Primitive Anophthalmia

Globe Of Eye Small

Small Eyeball

Hypoplasia Of Eye

Isolated Nanophthalmos

Rudimentary Eye

Dysplasia Of Eye

Macular Degeneration, Age-Related, 1

Macular Degeneration

Age-Related Macular Degeneration

Macular Degeneration, Age-Related

Age Related Macular Degeneration

Age Related Macular Degeneration 1

ARMD1

Senile Macular Degeneration

Maculopathy, Age-Related, 1

Macular Degeneration, Age-Related, Reduced Risk Of

Age Related Maculopathy 1

Age Related Maculopathies

Age Related Maculopathy

Senile Macular Retinal Degeneration

Macular Degeneration Of Retina

Age-Related Maculopathy

Amd

Armd

Age-Related Maculopathy, Susceptibility To

Maculopathy Age-Related

Macular Degeneration, Age-Related, 1, Susceptibility To

Maculopathy, Age-Related

Macular Degeneration, Age-Related, Type 1

Macular Degeneration, Age-Related, 2

Cone Dystrophy

Retinal Cone Dystrophy

Dystrophy, Cone

Cone Dystrophy 3

Stargardt Disease

Stargardt Disease 1

Stargardt Macular Dystrophy

Stargardt Disease-1

Juvenile Onset Macular Degeneration

Stargardt Macular Degeneration

Juvenile Macular Degeneration

Macular Dystrophy With Flecks, Type 1

Stgd

Fundus Flavimaculatus

Stargardt 1

Stargardts Disease

Vitelliform Macular Dystrophy

Best Disease

Juvenile-Onset Vitelliform Macular Dystrophy

Macular Dystrophy, Vitelliform

Best Macular Dystrophy

Vitelliform Dystrophy

Refractive Error

Refractive Errors

Leber Plus Disease

Leber Congenital Amaurosis

Lca

Leber'S Amaurosis

Leber'S Disease

Amaurosis Congenita Of Leber

Amaurosis Congenita Of Leber, Type 1

Lhon Plus Disease

Congenital Absence Of The Rods And Cones

Congenital Retinal Blindness

Crb

Congenital Amaurosis Of Retinal Origin

Leber'S Congenital Amaurosis

Leber Congenital Amaurosis 1

Leber'S Congenital Tapetoretinal Degeneration

Leber'S Congenital Tapetoretinal Dysplasia

Lca1

Leber Congenital Amaurosis Type 1

Retinal Blindness, Congenital

Amaurosis, Leber Congenital

Dysgenesis Neuroepithelialis Retinae

Hereditary Epithelial Dysplasia Of Retina

Hereditary Retinal Aplasia

Heredoretinopathia Congenitalis

Leber Abiotrophy

Leber Congenital Tapetoretinal Degeneration

Lebers Congenital Amaurosis

Optic Atrophy, Hereditary, Leber

Eye Disease

Eye Diseases

Abnormality Of The Eye

Toxoplasma Oculopathy

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus RDH5 VGNC VGNC:69277
Rattus norvegicus RDH5 RGD RGD:1308849
Bos taurus RDH5 VGNC VGNC:33843
Macaca mulatta RDH5 VGNC VGNC:82219
Mus musculus RDH5 MGD MGI:1201412
Canis familiaris RDH5 VGNC VGNC:45454