1. Gene
  2. Plec - plectin Gene

Plec - plectin Gene

种属: Rattus norvegicus

同用名: Pcn; Pltn; Plec1

基因 ID: 64204 | 基因类型: protein coding

关于 Plec

功能概要

Plectin is a prominent member of an important family of structurally and in part functionally related proteins, termed plakins or cytolinkers, that are capable of interlinking different elements of the Cytoskeleton. Plakins, with their multi-domain structure and enormous size, not only play crucial roles in maintaining cell and tissue integrity and orchestrating dynamic changes in cytoarchitecture and cell shape, but also serve as scaffolding platforms for the assembly, positioning, and regulation of signaling complexes (for reviews see PMID: 9701547, 11854008, and 17499243). Plectin is expressed as several protein isoforms in a wide range of cell types and tissues from a single gene located on chromosome 8 in humans (PMID: 8633055, 8698233). Until 2010, this locus was named plectin 1 (symbol PLEC1 in human; Plec1 in mouse and rat) and the gene product had been referred to as "hemidesmosomal protein 1" or "plectin 1, intermediate filament binding 500kDa". These names were replaced by plectin. The plectin gene locus in mouse on chromosome 15 has been analyzed in detail (PMID: 10556294, 14559777), revealing a genomic exon-intron organization with well over 40 exons spanning over 62 kb and an unusual 5' transcript complexity of plectin isoforms. Eleven exons (1-1j) have been identified that alternatively splice directly into a common exon 2 which is the first exon to encode plectin's highly conserved actin binding domain (ABD). Three additional exons (-1, 0a, and 0) splice into an alternative first coding exon (1c), and two additional exons (2alpha and 3alpha) are optionally spliced within the exons encoding the acting binding domain (exons 2-8). Analysis of the human locus has identified eight of the eleven alternative 5' exons found in mouse and rat (PMID: 14672974); exons 1i, 1j and 1h have not been confirmed in human. Furthermore, isoforms lacking the central rod domain encoded by exon 31 have been detected in mouse (PMID:10556294), rat (PMID: 9177781), and human (PMID: 11441066, 10780662, 20052759). The short alternative amino-terminal sequences encoded by the different first exons direct the targeting of the various isoforms to distinct subcellular locations (PMID: 14559777). As the expression of specific plectin isoforms was found to be dependent on cell type (tissue) and stage of development (PMID: 10556294, 12542521, 17389230) it appears that each cell type (tissue) contains a unique set (proportion and composition) of plectin isoforms, as if custom-made for specific requirements of the particular cells. Concordantly, individual isoforms were found to carry out distinct and specific functions (PMID: 14559777, 12542521, 18541706). In 1996, a number of groups reported that patients suffering from epidermolysis bullosa simplex with muscular dystrophy (EBS-MD) lacked plectin expression in skin and muscle tissues due to defects in the plectin gene (PMID: 8698233, 8941634, 8636409, 8894687, 8696340). Two Other subtypes of plectin-related EBS have been described: EBS-pyloric atresia (PA) and EBS-Ogna. For reviews of plectin-related diseases see PMID: 15810881, 19945614. Mutations in the plectin gene related to human diseases should be named based on the position in NM_000445 (human variant 1, isoform 1c), unless the mutation is located within one of the Other alternative first exons, in which case the position in the respective Reference Sequence should be used. [provided by RefSeq, Aug 2011]

Plec 基因产物(11)

mRNA Protein Name
NM_001164296.2 NP_001157768.1 plectin isoform 1c
NM_001164297.2 NP_001157769.1 plectin isoform 1f
NM_001164298.2 NP_001157770.1 plectin isoform 1e
NM_001164299.2 NP_001157771.1 plectin isoform 1hij
NM_001164302.2 NP_001157774.1 plectin isoform 1hij
NM_001164303.2 NP_001157775.1 plectin isoform 1d
NM_001164304.2 NP_001157776.1 plectin isoform 1b
NM_001164305.2 NP_001157777.1 plectin isoform 1hij
NM_001164307.2 NP_001157779.1 plectin isoform 1g
NM_001164308.2 NP_001157780.1 plectin isoform 1a
NM_022401.3 NP_071796.2 plectin isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables ankyrin binding IPI
IPI: 通过物理相互作用推断
21223964 RGD
enables cytoskeletal protein binding IDA
IDA: 通过直接分析推断
12095991 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
12200133 RGD
enables structural constituent of cytoskeleton IMP
IMP: 通过突变表型推断
12095991 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in epithelial cell differentiation IEP
IEP: 通过表达模式推断
8686756 RGD
involved in female pregnancy IEP
IEP: 通过表达模式推断
12389737 RGD
involved in response to nutrient IDA
IDA: 通过直接分析推断
12095991 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in apical plasma membrane IDA
IDA: 通过直接分析推断
12389737 RGD
located in basal plasma membrane IDA
IDA: 通过直接分析推断
12389737 RGD
located in perinuclear region of cytoplasm IDA
IDA: 通过直接分析推断
8686756 RGD
located in sarcolemma IDA
IDA: 通过直接分析推断
11482454 RGD
located in sarcoplasm IDA
IDA: 通过直接分析推断
21223964 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断
蛋白主名 其他名称

plectin

plectin 1

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Plec NCBI NCBI:5339