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  2. BMAL2 - basic helix-loop-helix ARNT like 2 Gene

BMAL2 - basic helix-loop-helix ARNT like 2 Gene

中文名称:基本的螺旋-环-螺旋 ARNT 样 2

种属: Homo sapiens

同用名: CLIF; MOP9; PASD9; ARNTL2; bHLHe6

基因 ID: 56938 | 基因类型: protein coding

关于 BMAL2

Cytogenetic location: 12p11.23 Genomic coordinates (GRCh38): 12:27,332,836-27,425,286 (from NCBI)

This gene has 9 transcripts (splice variants), 245 orthologues and 6 paralogues. Broad expression in esophagus (RPKM 6.4), appendix (RPKM 3.2) and 17 other tissues.

功能概要

该基因编码属于 PAS (PER、ARNT、SIM) 超家族的基本螺旋-环-螺旋转录因子。 PAS 蛋白在适应低大气和细胞氧气水平、暴露于某些环境污染物以及光和温度的昼夜振荡方面发挥着重要作用。该蛋白与昼夜节律 CLOCK 蛋白、结构相关的 MOP4 和缺氧诱导因子 (如 HIF1alpha) 形成转录活性异二聚体。与其作为昼夜节律和缺氧因子的生物学相关伙伴的作用一致,该蛋白质在大脑区域共表达,例如丘脑、下丘脑和杏仁核。已经针对该基因描述了编码不同亚型的选择性剪接转录物变体。[RefSeq 提供,2011 年 10 月]

This gene encodes a basic helix-loop-helix transcription factor belonging to the PAS (PER, ARNT, SIM) superfamily. The PAS proteins play important roles in adaptation to low atmospheric and cellular oxygen levels, exposure to certain environmental pollutants, and diurnal oscillations in light and temperature. This protein forms a transcriptionally active heterodimer with the circadian CLOCK protein, the structurally related MOP4, and hypoxia-inducible factors, such as HIF1alpha. Consistent with its role as a biologically relevant partner of circadian and hypoxia factors, this protein is coexpressed in regions of the brain such as the thalamus, hypothalamus, and amygdala. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Oct 2011]

BMAL2 基因产物(11)

mRNA Protein Name
NM_001248002.3 NP_001234931.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 2
NM_001248003.3 NP_001234932.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 3
NM_001248004.3 NP_001234933.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 4
NM_001248005.3 NP_001234934.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 5
NM_001394524.1 NP_001381453.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 6
NM_001394525.1 NP_001381454.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 7
NM_001394526.1 NP_001381455.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 8
NM_001394527.1 NP_001381456.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 9
NM_001394528.1 NP_001381457.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 10
NM_001394529.1 NP_001381458.1 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 11
NM_020183.6 NP_064568.3 aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription factor activity IDA
IDA: 通过直接分析推断
12055078 GOA
enables DNA-binding transcription factor activity, RNA polymerase II-specific IDA
IDA: 通过直接分析推断
15147242 GOA
enables E-box binding IDA
IDA: 通过直接分析推断
12738229 GOA
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
15147242 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11018023 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in circadian regulation of gene expression IDA
IDA: 通过直接分析推断
10864977 GOA
acts upstream of or within circadian rhythm IDA
IDA: 通过直接分析推断
10864977 GOA
involved in positive regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
10864977 GOA
involved in positive regulation of circadian rhythm IDA
IDA: 通过直接分析推断
12738229 GOA
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
15147242 GOA
acts upstream of or within regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
12055078 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of CLOCK-BMAL transcription complex IPI
IPI: 通过物理相互作用推断
10864977 GOA
located in nucleus IDA
IDA: 通过直接分析推断
12055078 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

BMAL2 蛋白结构

HLH

HLH: Helix-loop-helix DNA-binding domain (109 - 160)

PAS

PAS: PAS fold (183 - 244)

PAS_11

PAS_11: PAS domain (370 - 472)

  • 0
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  • 200
  • 300
  • 400
  • 500
  • 600
  • 636 a.a.
蛋白主名 其他名称

aryl hydrocarbon receptor nuclear translocator-like protein 2

CYCLE-like factor

BMAL2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
BMAL2 Q8WYA1 CLOCK Homo sapiens O15516 33961781
种属内
BMAL2 Q8WYA1 CLOCK Homo sapiens O15516
Y2H
11018023
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Hepatorenal Syndrome

Hepato-Renal Syndrome

Hepatorenal Failure

Hrf - [Hepatorenal Failure]

Hepatorenal Degeneration

Hepatic Renal Syndrome

Hepatic Renal Failure

Renal Hepatic Failure

Urohepatic Syndrome

Hepatic Vascular Disease

Vascular Disorder Of Liver

Acute Kidney Failure

Acute Renal Failure

Acute Kidney Injury

Renal Failure Acute

Kidney Failure, Acute

Pre-Renal Acute Kidney Injury

Nontraumatic Acute Kidney Injury

Aki - [Acute Kidney Injury]

Arf - [Acute Kidney Failure]

Acute Kidney Disease

Acute Kidney Impairment

Acute Ischaemic Renal Failure

Acute Hypoxic Kidney Failure

Acute Kidney Shutdown

Acute Renal Oedema

Acute Renal Impairment

Acute Kidney Collapse

Acute Necrotising Kidney

Acute Renal Suppression

Esophageal Varix

Esophageal Varices

Bleeding Esophageal Varices

Bleeding Oesophageal Varices

Esophageal Varices In Disease Classified Elsewhere, With Bleeding

Esophageal Varices With Bleeding

Esophageal Varices With Bleeding In Disease Ec

Esophageal Varices Without Bleeding

Esophageal Varices Without Mention Of Bleeding

Delayed Sleep Phase Disorder

Delayed Sleep Phase Syndrome

Delayed Sleep Phase Syndrome, Susceptibility To

DSPD

Delayed Sleep Phase Disorder, Susceptibility To

DSPS

Sleep Phase, Delayed, Disorder

Sleep Phase Syndrome, Delayed, Susceptibility To

Advanced Sleep Phase Syndrome

Fasps

Familial Advanced Sleep-Phase Syndrome

Advanced Sleep Phase Syndrome, Familial

Familial Advanced Sleep Phase Syndrome

Sleep Phase Syndrome, Advanced, Familial

Advanced Sleep-Phase Syndrome, Familial

Major Depressive Disorder

Seasonal Affective Disorder

Unipolar Depression

Depression

MDD

Depressive Disorder

Unipolar Depression, Susceptibility To

Major Depressive Disorder 1

Major Depressive Disorder, Response To Citalopram Therapy In

Major Depressive Disorder 2

Winter Depression

Single Major Depressive Episode

Sad

Clinical Depression

Major Depression

Depressive Syndrome

Major Depressive Disorder And Accelerated Response To Antidepressant Drug Treatment

Seasonal Affective Disorder, Susceptibility To

Recurrent Major Depression

Affective Disorder, Seasonal

Depression In A Seasonal Pattern

Depression

Seasonal

Major Depressive Disorder With A Seasonal Pattern

Seasonal Depression

Seasonal Mood Disorder

Mental Depression

Recurrent Major Depressive Episodes

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus BMAL2 VGNC VGNC:83500
Rattus norvegicus BMAL2 RGD RGD:620230
Mus musculus BMAL2 MGD MGI:2684845
Bos taurus BMAL2 VGNC VGNC:49075
Canis familiaris BMAL2 VGNC VGNC:48873
Macaca mulatta BMAL2 VGNC VGNC:99889