1. Gene
  2. PRDM10 - PR/SET domain 10 Gene

PRDM10 - PR/SET domain 10 Gene

中文名称:PR/SET 域 10

种属: Homo sapiens

同用名: PFM7; TRIS

基因 ID: 56980 | 基因类型: protein coding

关于 PRDM10

Cytogenetic location: 11q24.3 Genomic coordinates (GRCh38): 11:129,899,711-130,002,835 (from NCBI)

This gene has 8 transcripts (splice variants), 194 orthologues and 36 paralogues. Ubiquitous expression in skin (RPKM 1.6), lymph node (RPKM 1.5) and 25 other tissues.

功能概要

该基因编码的蛋白质是一种含有 C2H2 型锌指的转录因子。它还包含一个正调控域,该域已在其他几种锌指转录因子中发现,包括那些参与 B 细胞分化和肿瘤抑制的转录因子。对小鼠对应物的研究表明,这种蛋白质可能参与中枢神经系统 (CNS) 的发育,以及神经元贮积病的发病机制。已经观察到编码不同同种型的多个选择性剪接的转录物变体。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is a transcription factor that contains C2H2-type zinc-fingers. It also contains a positive regulatory domain, which has been found in several Other zinc-finger transcription factors including those involved in B cell differentiation and tumor suppression. Studies of the mouse counterpart suggest that this protein may be involved in the development of the central nerve system (CNS), as well as in the pathogenesis of neuronal storage disease. Multiple alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Jul 2008]

PRDM10 基因产物(14)

mRNA Protein Name
NM_001367890.1 NP_001354819.1 PR domain zinc finger protein 10 isoform 10
NM_001367891.1 NP_001354820.1 PR domain zinc finger protein 10 isoform 7
NM_001367892.1 NP_001354821.1 PR domain zinc finger protein 10 isoform 6
NM_001367893.1 NP_001354822.1 PR domain zinc finger protein 10 isoform 5
NM_001367894.1 NP_001354823.1 PR domain zinc finger protein 10 isoform 11
NM_001367895.1 NP_001354824.1 PR domain zinc finger protein 10 isoform 14
NM_001367896.1 NP_001354825.1 PR domain zinc finger protein 10 isoform 13
NM_001367897.1 NP_001354826.1 PR domain zinc finger protein 10 isoform 12
NM_001367898.1 NP_001354827.1 PR domain zinc finger protein 10 isoform 9
NM_001367899.1 NP_001354828.1 PR domain zinc finger protein 10 isoform 8
NM_020228.3 NP_064613.2 PR domain zinc finger protein 10 isoform 1
NM_199437.2 NP_955469.1 PR domain zinc finger protein 10 isoform 2
NM_199438.2 NP_955470.1 PR domain zinc finger protein 10 isoform 3
NM_199439.2 NP_955471.1 PR domain zinc finger protein 10 isoform 4
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription factor activity IDA
IDA: 通过直接分析推断
36440963 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
25416956 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
36440963 GOA
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
31143550 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
is active in chromatin IDA
IDA: 通过直接分析推断
36440963 GOA
located in chromatin IDA
IDA: 通过直接分析推断
31143550 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
36440963 GOA
part of transcription repressor complex IDA
IDA: 通过直接分析推断
31143550 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PRDM10 蛋白结构

zf-C2H2_jaz

zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding (357 - 377)

zf-C2H2

zf-C2H2: Zinc finger, C2H2 type (530 - 552)

zf-met

zf-met: Zinc-finger of C2H2 type (561 - 580)

zf-C2H2

zf-C2H2: Zinc finger, C2H2 type (616 - 639)

zf-C2H2

zf-C2H2: Zinc finger, C2H2 type (644 - 666)

zf-C2H2

zf-C2H2: Zinc finger, C2H2 type (674 - 695)

zf-C2H2_4

zf-C2H2_4: C2H2-type zinc finger (773 - 795)

zf-C2H2_4

zf-C2H2_4: C2H2-type zinc finger (835 - 857)

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  • 1160 a.a.
蛋白主名 其他名称

PR domain zinc finger protein 10

PR domain 10

PRDM10 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
PRDM10 Q9NQV6 REL Homo sapiens Q04864 25416956
种属内
PRDM10 Q9NQV6 REL Homo sapiens Q04864 25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Canis familiaris PRDM10 VGNC VGNC:44945
Felis catus PRDM10 VGNC VGNC:64343
Bos taurus PRDM10 VGNC VGNC:33289
Macaca mulatta PRDM10 VGNC VGNC:76250
Rattus norvegicus PRDM10 RGD RGD:1560384
Mus musculus PRDM10 MGD MGI:2682952