1. Academic Validation
  2. p300/CBP is an essential driver of pathogenic enhancer activity and gene expression in Ewing sarcoma

p300/CBP is an essential driver of pathogenic enhancer activity and gene expression in Ewing sarcoma

  • EMBO Rep. 2025 Oct;26(19):4766-4793. doi: 10.1038/s44319-025-00552-z.
Laura C Godfrey 1 Brandon Regalado 1 Sydney R Schweber 1 Charles Hatton 1 Daniela V Wenge 1 Yanhe Wen 1 Meaghan Boileau 1 Maria Wessels 1 2 Jun Qi 3 Christopher J Ott 4 5 6 Kimberly Stegmaier 1 5 Miguel N Rivera 5 7 Scott A Armstrong 8
Affiliations

Affiliations

  • 1 Department of Pediatric Oncology, Dana-Farber Cancer Institute, and Division of Hematology/Oncology, Boston Children's Hospital, and Harvard Medical School, Boston, MA, USA.
  • 2 Department of Hematology, Hemostasis, Oncology and Stem Cell Transplantation, Hannover Medical School (MHH), Hannover, Germany.
  • 3 Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
  • 4 Massachusetts General Hospital Cancer Center, Charlestown, MA, USA.
  • 5 Broad Institute of MIT & Harvard, Cambridge, MA, USA.
  • 6 Harvard Medical School, Boston, MA, USA.
  • 7 Department of Pathology, Massachusetts General Hospital, Boston, MA, USA.
  • 8 Department of Pediatric Oncology, Dana-Farber Cancer Institute, and Division of Hematology/Oncology, Boston Children's Hospital, and Harvard Medical School, Boston, MA, USA. Scott_Armstrong@dfci.harvard.edu.
Abstract

The t(11;22) translocation encodes the EWS::FLI1 fusion oncoprotein which is the primary driver of Ewing sarcoma. EWS::FLI1 creates unique, de novo pathogenic enhancers that drive gene expression and are a central mechanism of oncogenesis. Which chromatin regulatory proteins are critical to this mechanism is understudied. Here, we perform a comparative analysis of the function of the chromatin complexes MLL3/4 and p300/CBP in EWS::FLI1-mediated gene regulation. Using EWS::FLI1 degradation models, we define a subset of EWS::FLI1-sensitive enhancers whose activity correlates with p300/CBP function. We perturb both chromatin complexes to establish that in contrast to MLL3/4, p300/CBP is a critical regulator of EWS::FLI1-driven enhancer activity and downstream gene expression. We also show that p300/CBP small-molecule inhibition decelerates tumor growth in vivo. Our work highlights the context-dependent nature of chromatin protein activity at oncogenic enhancers and reveals p300/CBP as an important regulator of Ewing sarcoma.

Keywords

EWS::FLI1; Enhancers; Ewing Sarcoma; Histone Modifications; p300/CBP.

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