1. Gene
  2. Vcp - valosin-containing protein Gene

Vcp - valosin-containing protein Gene

中文名称:含缬酪肽蛋白

种属: Rattus norvegicus

基因 ID: 116643 | 基因类型: protein coding

关于 Vcp

Primary_assembly 5: 57,210,168-57,229,571 reverse strand.mRatBN7.2:CM026978.1

This gene has 1 transcript (splice variant), 229 orthologues, 6 paralogues and is associated with 25 phenotypes. Biased expression in Heart (RPKM 1161.1), Muscle (RPKM 181.6) and 9 other tissues.

功能概要

该基因编码的蛋白可启动 ATP 水解活性;腺苷核糖核苷酸结合活性;和相同的蛋白质结合活性。参与内质网到高尔基体小泡介导的转运;泛素依赖性蛋白质分解代谢过程的正调控;和突触组织的调节。位于胞质溶胶和内质网中。 VCP-NPL4-UFD1 AAA ATPase 复合体和 VCP-NSFL1C 复合体的一部分。在谷氨酸能突触中活跃。该基因的人类直系同源基因与多种疾病有关,包括 Charcot-Marie-Tooth 病 2Y 型;佩吉特骨病;肌萎缩侧索硬化 14 型;伴有或不伴有额颞叶痴呆的早发性佩吉特骨病的包涵体肌病 1;和包涵体肌炎。与人类 VCP(含缬乐肽的蛋白质)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables ATP hydrolysis activity; adenyl ribonucleotide binding activity; and identical protein binding activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport; positive regulation of ubiquitin-dependent protein catabolic process; and regulation of synapse organization. Located in cytosol and endoplasmic reticulum. Part of VCP-NPL4-UFD1 AAA ATPase complex and VCP-NSFL1C complex. Is active in glutamatergic synapse. Human ortholog(s) of this gene implicated in several diseases, including Charcot-Marie-Tooth disease type 2Y; Paget's disease of bone; amyotrophic lateral sclerosis type 14; inclusion body myopathy with early-onset Paget disease of bone with or without frontotemporal dementia 1; and inclusion body myositis. Orthologous to human VCP (valosin containing protein). [provided by Alliance of Genome Resources, Apr 2022]

Vcp 基因产物(1)

mRNA Protein Name
NM_053864.2 NP_446316.1 transitional endoplasmic reticulum ATPase
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables ADP binding IMP
IMP: 通过突变表型推断
18332143 RGD
enables ATP binding IDA
IDA: 通过直接分析推断
7806566 RGD
enables ATP binding IMP
IMP: 通过突变表型推断
18332143 RGD
enables ATP hydrolysis activity IDA
IDA: 通过直接分析推断
7806566 RGD
enables ATP hydrolysis activity IMP
IMP: 通过突变表型推断
18332143 RGD
enables identical protein binding IDA
IDA: 通过直接分析推断
7806566 RGD
enables identical protein binding IPI
IPI: 通过物理相互作用推断
7806566 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
9214505 RGD
enables protein-containing complex binding IPI
IPI: 通过物理相互作用推断
10811609 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in ERAD pathway IDA
IDA: 通过直接分析推断
12847084 RGD
involved in endoplasmic reticulum to Golgi vesicle-mediated transport IMP
IMP: 通过突变表型推断
7806566 RGD
involved in positive regulation of ubiquitin-dependent protein catabolic process IMP
IMP: 通过突变表型推断
16103111 RGD
involved in regulation of synapse organization IDA
IDA: 通过直接分析推断
22105171 RGD
involved in regulation of synapse organization IMP
IMP: 通过突变表型推断
22105171 RGD
involved in retrograde protein transport, ER to cytosol EXP
EXP: 通过实验结果推断
12847084 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of VCP-NPL4-UFD1 AAA ATPase complex EXP
EXP: 通过实验结果推断
22232657 RGD
part of VCP-NPL4-UFD1 AAA ATPase complex IDA
IDA: 通过直接分析推断
10811609 RGD
part of VCP-NSFL1C complex IPI
IPI: 通过物理相互作用推断
9214505 RGD
located in cytosol IDA
IDA: 通过直接分析推断
9214505 RGD
is active in glutamatergic synapse IDA
IDA: 通过直接分析推断
22105171 RGD
is active in glutamatergic synapse IMP
IMP: 通过突变表型推断
22105171 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Vcp 蛋白结构

CDC48

CDC48: cl36852 (24 - 763)

  • 0
  • 200
  • 400
  • 600
  • 806 a.a.
蛋白主名 其他名称

transitional endoplasmic reticulum ATPase

15S Mg(2+)-ATPase p97 subunit

TER ATPase

Vcp 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
Vcp P46462 Nsfl1c Rattus norvegicus O35987 9214505
种属内
Vcp P46462 Nsfl1c Rattus norvegicus O35987
GMS
9214505
种属内
Vcp P46462 Nsfl1c Rattus norvegicus O35987
GMS
10811609
种属内
Vcp P46462 Nsfl1c Rattus norvegicus O35987 20691684
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Vcp NCBI NCBI:7415