1. Gene
  2. Scn2a - sodium channel, voltage-gated, type II, alpha Gene

Scn2a - sodium channel, voltage-gated, type II, alpha Gene

中文名称:钠通道,电压门控, II 型, α

种属: Mus musculus

同用名: Nav1.2; Scn2a1; 6430408L10; A230052E19Rik

基因 ID: 110876 | 基因类型: protein coding

关于 Scn2a

Chromosome 2: 65,451,115-65,597,791 forward strand.GRCm39:CM000995.3

This gene has 10 transcripts (splice variants), 130 orthologues, 26 paralogues and is associated with 18 phenotypes. Biased expression in cerebellum adult (RPKM 21.), cortex adult (RPKM 18.1) and 4 other tissues.

功能概要

电压门控钠通道是一种跨膜糖蛋白复合物,由具有四个重复结构域的大 α 亚基组成,每个重复结构域由六个跨膜片段和一个或多个调节性 β 亚基组成。电压门控钠通道负责神经元和肌肉中动作电位的产生和传播。该基因编码钠通道α亚基基因家族的一个成员。在人类中,该基因的变体与癫痫症和自闭症谱系障碍有关。敲除突变纯合子小鼠死于严重缺氧和广泛的神经元细胞死亡,而功能突变的获得导致进行性癫痫症。可变剪接导致多个转录本变体。 [RefSeq 提供,2016 年 11 月]

Voltage-gated sodium channels are Transmembrane Glycoprotein complexes composed of a large alpha subunit with four repeat domains, each of which is composed of six membrane-spanning segments, and one or more regulatory beta subunits. Voltage-gated sodium channels are responsible for the generation and propagation of action potentials in neurons and muscle. This gene encodes one member of the Sodium Channel alpha subunit gene family. In humans, variants of this gene are associated with seizure disorders and autism spectrum disorder. Mice homozygous for a knockout mutation die with severe hypoxia and extensive neuronal cell death, while gain of function mutations result in progressive seizure disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2016]

Scn2a 基因产物(3)

mRNA Protein Name
NM_001346680.1 NP_001333609.1 sodium channel protein type 2 subunit alpha isoform 3
NM_001346679.2 NP_001333608.1 sodium channel protein type 2 subunit alpha isoform 2
NM_001099298.3 NP_001092768.1 sodium channel protein type 2 subunit alpha isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables voltage-gated sodium channel activity IDA
IDA: 通过直接分析推断
10827969 MGI
enables voltage-gated sodium channel activity IMP
IMP: 通过突变表型推断
10827969 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of or within dentate gyrus development IGI
IGI: 通过遗传相互作用推断
16464983 MGI
acts upstream of or within determination of adult lifespan IGI
IGI: 通过遗传相互作用推断
21156207 MGI
acts upstream of or within intrinsic apoptotic signaling pathway in response to osmotic stress IMP
IMP: 通过突变表型推断
10827969 MGI
involved in memory IMP
IMP: 通过突变表型推断
29867081 MGI
acts upstream of or within nerve development IGI
IGI: 通过遗传相互作用推断
16464983 MGI
acts upstream of or within nerve development IMP
IMP: 通过突变表型推断
21156207 MGI
acts upstream of or within nervous system development IMP
IMP: 通过突变表型推断
10827969 MGI
acts upstream of or within neuron apoptotic process IMP
IMP: 通过突变表型推断
10827969 MGI
involved in sodium ion transmembrane transport IMP
IMP: 通过突变表型推断
10827969 MGI
acts upstream of or within sodium ion transport IDA
IDA: 通过直接分析推断
10827969 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in T-tubule IDA
IDA: 通过直接分析推断
15746173 MGI
located in axon IDA
IDA: 通过直接分析推断
17928448 MGI
is active in glutamatergic synapse IDA
IDA: 通过直接分析推断
22528969 MGI
located in intercalated disc IDA
IDA: 通过直接分析推断
15746173 MGI
located in membrane IDA
IDA: 通过直接分析推断
10827969 MGI
located in paranode region of axon IDA
IDA: 通过直接分析推断
16723544 MGI
located in plasma membrane IDA
IDA: 通过直接分析推断
10827969 MGI
is active in presynaptic membrane IDA
IDA: 通过直接分析推断
22528969 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Scn2a 蛋白结构

Ion_trans

Ion_trans: pfam00520 (127 - 434)

Na_trans_cytopl

Na_trans_cytopl: pfam11933 (557 - 709)

Ion_trans

Ion_trans: pfam00520 (758 - 971)

Na_trans_assoc

Na_trans_assoc: pfam06512 (997 - 1203)

Ion_trans

Ion_trans: pfam00520 (1207 - 1482)

Na_channel_gate

Na_channel_gate: cd13433 (1474 - 1526)

Ion_trans

Ion_trans: pfam00520 (1531 - 1786)

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  • 2006 a.a.
蛋白主名 其他名称

sodium channel protein type 2 subunit alpha

sodium channel, voltage-gated, type II, alpha 1

sodium channel, voltage-gated, type II, alpha polypeptide 1

voltage-gated sodium channel subunit alpha Nav1.2

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Scn2a NCBI NCBI:6326