1. Gene
  2. Pcdh15 - protocadherin 15 Gene

Pcdh15 - protocadherin 15 Gene

种属: Mus musculus

同用名: av; roda; Ush1f; nmf19; Gm9815

基因 ID: 11994 | 基因类型: protein coding

关于 Pcdh15

功能概要

Predicted to enable calcium ion binding activity. Acts upstream of or within several processes, including adult walking behavior; detection of mechanical stimulus involved in sensory perception; and plasma membrane bounded cell projection organization. Located in several cellular components, including photoreceptor outer segment; plasma membrane; and stereocilium. Is expressed in several structures, including central nervous system; gut epithelium; metanephros; sensory organ; and vibrissa follicle. Used to study Usher syndrome type 1F and autosomal recessive nonsyndromic deafness 23. Human ortholog(s) of this gene implicated in Usher syndrome type 1D; Usher syndrome type 1F; and autosomal recessive nonsyndromic deafness 23. Orthologous to human PCDH15 (protocadherin related 15). [provided by Alliance of Genome Resources, Apr 2022]

Pcdh15 基因产物(14)

mRNA Protein Name
NM_001142735.1 NP_001136207.1 protocadherin-15 isoform CD1-2 precursor
NM_001142736.1 NP_001136208.1 protocadherin-15 isoform CD1-4 precursor
NM_001142737.1 NP_001136209.1 protocadherin-15 isoform CD1-6 precursor
NM_001142738.1 NP_001136210.1 protocadherin-15 isoform CD1-8 precursor
NM_001142739.1 NP_001136211.1 protocadherin-15 isoform CD1-9 precursor
NM_001142740.1 NP_001136212.1 protocadherin-15 isoform CD1-7 precursor
NM_001142741.1 NP_001136213.1 protocadherin-15 isoform CD1-10 precursor
NM_001142742.1 NP_001136214.1 protocadherin-15 isoform CD2-1 precursor
NM_001142743.1 NP_001136215.1 protocadherin-15 isoform CD2-2 precursor
NM_001142746.1 NP_001136218.1 protocadherin-15 isoform CD3-1 precursor
NM_001142747.1 NP_001136219.1 protocadherin-15 isoform SI-1 precursor
NM_001142748.1 NP_001136220.1 protocadherin-15 isoform SI-2 precursor
NM_001142760.1 NP_001136232.1 protocadherin-15 isoform CD3-2 precursor
NM_023115.3 NP_075604.2 protocadherin-15 isoform CD1-1 precursor
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
15590703 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of or within actin filament organization IMP
IMP: 通过突变表型推断
11124469 MGI
acts upstream of or within adult walking behavior IMP
IMP: 通过突变表型推断
11124469 MGI
acts upstream of or within auditory receptor cell stereocilium organization IGI
IGI: 通过遗传相互作用推断
15537665 MGI
acts upstream of or within auditory receptor cell stereocilium organization IMP
IMP: 通过突变表型推断
10978835 MGI
acts upstream of or within detection of mechanical stimulus involved in equilibrioception IMP
IMP: 通过突变表型推断
16481439 MGI
acts upstream of or within detection of mechanical stimulus involved in sensory perception of sound IMP
IMP: 通过突变表型推断
16481439 MGI
acts upstream of or within inner ear auditory receptor cell differentiation IMP
IMP: 通过突变表型推断
16481439 MGI
acts upstream of or within inner ear development IMP
IMP: 通过突变表型推断
10978835 MGI
acts upstream of or within inner ear receptor cell stereocilium organization IMP
IMP: 通过突变表型推断
18339676 MGI
acts upstream of or within locomotory behavior IMP
IMP: 通过突变表型推断
10430593 MGI
acts upstream of or within morphogenesis of an epithelium IMP
IMP: 通过突变表型推断
11138007 MGI
acts upstream of or within multicellular organism growth IMP
IMP: 通过突变表型推断
10978835 MGI
acts upstream of or within non-motile cilium assembly IMP
IMP: 通过突变表型推断
16481439 MGI
acts upstream of or within righting reflex IMP
IMP: 通过突变表型推断
10978835 MGI
acts upstream of or within sensory perception of sound IGI
IGI: 通过遗传相互作用推断
15537665 MGI
acts upstream of or within sensory perception of sound IMP
IMP: 通过突变表型推断
5093631 MGI
acts upstream of or within startle response IMP
IMP: 通过突变表型推断
15811708 MGI
acts upstream of or within visual perception IMP
IMP: 通过突变表型推断
16799054 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
16481439 MGI
located in photoreceptor outer segment IDA
IDA: 通过直接分析推断
14570705 MGI
located in plasma membrane IDA
IDA: 通过直接分析推断
23217710 MGI
is active in stereocilium EXP
EXP: 通过实验结果推断
26754646 MGI
located in stereocilium IDA
IDA: 通过直接分析推断
14570705 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断
蛋白主名 其他名称

protocadherin-15

Ames waltzer

protocadherin 15 CD2

Pcdh15 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
Pcdh15 Q99PJ1 Ush1c Mus musculus Q9ES64
Y2H
15590703
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Pcdh15 NCBI NCBI:65217