1. Gene
  2. NIPBL - NIPBL cohesin loading factor Gene

NIPBL - NIPBL cohesin loading factor Gene

中文名称:NIPBL cohesin 加载因子

种属: Homo sapiens

同用名: CDLS; IDN3; Scc2; CDLS1; IDN3-B

基因 ID: 25836 | 基因类型: protein coding

关于 NIPBL

Cytogenetic location: 5p13.2 Genomic coordinates (GRCh38): 5:36,876,769-37,066,413 (from NCBI)

This gene has 9 transcripts (splice variants), 230 orthologues and is associated with 4 phenotypes. Ubiquitous expression in thyroid (RPKM 7.3), bone marrow (RPKM 7.1) and 25 other tissues.

功能概要

该基因编码黑腹果蝇 Nipped-B 基因产物和真菌 Scc2 型姐妹染色单体凝聚蛋白的同系物。果蝇蛋白促进远程增强子的增强子-启动子通信,并在发育调节中发挥作用。它也与在姐妹染色单体凝聚、染色体凝集和 DNA 修复中具有广泛作用的染色体粘附素家族同源。人类蛋白质具有二分核靶向序列和推定的 HEAT 重复序列。 Condensins、cohesins 和其他具有染色体相关功能的复合物也包含 HEAT 重复序列。该基因的突变会导致 Cornelia de Lange 综合征,这是一种以面部特征畸形、生长迟缓、肢体减少缺陷和认知障碍为特征的疾病。已发现该基因的两个转录本变体编码不同的亚型。[RefSeq 提供,2008 年 7 月]

This gene encodes the homolog of the Drosophila melanogaster Nipped-B gene product and Fungal Scc2-type sister chromatid cohesion proteins. The Drosophila protein facilitates enhancer-promoter communication of remote enhancers and plays a role in developmental regulation. It is also homologous to a family of chromosomal adherins with broad roles in sister chromatid cohesion, chromosome condensation, and DNA repair. The human protein has a bipartite nuclear targeting sequence and a putative HEAT repeat. Condensins, cohesins and Other complexes with chromosome-related functions also contain HEAT repeats. Mutations in this gene result in Cornelia de Lange syndrome, a disorder characterized by dysmorphic facial features, growth delay, limb reduction defects, and cognitive disability. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

NIPBL 基因产物(2)

mRNA Protein Name
NM_015384.5 NP_056199.2 nipped-B-like protein isoform B
NM_133433.4 NP_597677.2 nipped-B-like protein isoform A
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables chromo shadow domain binding IPI
IPI: 通过物理相互作用推断
15882967 GOA
enables cohesin loader activity IMP
IMP: 通过突变表型推断
22628566 GOA
enables histone deacetylase binding IPI
IPI: 通过物理相互作用推断
18854353 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
16682347 GOA
enables transcription corepressor activity IDA
IDA: 通过直接分析推断
18854353 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in DNA damage response IMP
IMP: 通过突变表型推断
17468178 GOA
involved in brain development IMP
IMP: 通过突变表型推断
8291537 GOA
involved in cellular response to X-ray IMP
IMP: 通过突变表型推断
17468178 GOA
involved in chromatin remodeling IDA
IDA: 通过直接分析推断
18854353 GOA
involved in cognition IMP
IMP: 通过突变表型推断
15146186 GOA
involved in developmental growth IMP
IMP: 通过突变表型推断
15146186 GOA
involved in ear morphogenesis IMP
IMP: 通过突变表型推断
8291537 GOA
involved in embryonic digestive tract morphogenesis IMP
IMP: 通过突变表型推断
8291537 GOA
involved in embryonic forelimb morphogenesis IMP
IMP: 通过突变表型推断
8291537 GOA
involved in external genitalia morphogenesis IMP
IMP: 通过突变表型推断
15146186 GOA
involved in eye morphogenesis IMP
IMP: 通过突变表型推断
8291537 GOA
involved in face morphogenesis IMP
IMP: 通过突变表型推断
15146186 GOA
involved in forelimb morphogenesis IMP
IMP: 通过突变表型推断
15146186 GOA
involved in gallbladder development IMP
IMP: 通过突变表型推断
19242925 GOA
involved in heart morphogenesis IMP
IMP: 通过突变表型推断
8291537 GOA
involved in maintenance of mitotic sister chromatid cohesion IMP
IMP: 通过突变表型推断
16682347 GOA
involved in mitotic sister chromatid cohesion IDA
IDA: 通过直接分析推断
22628566 GOA
involved in mitotic sister chromatid cohesion IMP
IMP: 通过突变表型推断
16100726 GOA
involved in negative regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
18854353 GOA
involved in outflow tract morphogenesis IMP
IMP: 通过突变表型推断
19242925 GOA
involved in protein localization IMP
IMP: 通过突变表型推断
17468178 GOA
involved in regulation of developmental growth IMP
IMP: 通过突变表型推断
19242925 GOA
involved in regulation of embryonic development IMP
IMP: 通过突变表型推断
19242925 GOA
involved in regulation of hair cycle IMP
IMP: 通过突变表型推断
15146186 GOA
involved in sensory perception of sound IMP
IMP: 通过突变表型推断
15146186 GOA
involved in uterus morphogenesis IMP
IMP: 通过突变表型推断
19242925 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of SMC loading complex IDA
IDA: 通过直接分析推断
16682347 GOA
part of Scc2-Scc4 cohesin loading complex IDA
IDA: 通过直接分析推断
22628566 GOA
located in nucleus IDA
IDA: 通过直接分析推断
16802858 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

NIPBL 蛋白结构

Cohesin_HEAT

Cohesin_HEAT: HEAT repeat associated with sister chromatid cohesion (1794 - 1835)

Nipped-B_C

Nipped-B_C: Sister chromatid cohesion C-terminus (2274 - 2456)

  • 0
  • 500
  • 1000
  • 1500
  • 2000
  • 2500
  • 2804 a.a.
蛋白主名 其他名称

nipped-B-like protein

Nipped-B homolog

NIPBL 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
NIPBL Q6KC79 MAU2 Homo sapiens Q9Y6X3
Y2H
21934712
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Cornelia De Lange Syndrome 1

De Lange Syndrome

CDLS1

Cdl

Cdls

Typus Degenerativus Amstelodamensis

Brachmann-De Lange Syndrome

Bdls

Amstelodamensis Typus Degenerativus

Cornelia De Lange Syndrome, Type 1

Cornelia De Lange Syndrome

De Lange Syndrome

Brachmann De Lange Syndrome

Brachmann-De Lange Syndrome

Cdls

Bdls

Typus Degenerativus Amstelodamensis

Cleft Palate, Isolated

Cleft Palate

Isolated Cleft Palate

CPI

Cp

Palatoschisis

Cleft Palate Isolated

Uranostaphyloschisis

Congenital Fissure Of Palate

Cleft Of Secondary Palate

Tetralogy Of Fallot

TOF

Fallot Tetralogy

Ventricular Septal Defect With Pulmonary Stenosis Or Atresia, Dextraposition Of Aorta, And Hypertrophy Of Right Ventricle

Tetrad Of Fallot

Fallot Tetrad

Fallot Disease

Fallot Complex

Subpulmonic Stenosis, Ventricular Septal Defect, Overriding Aorta, And Right Ventricular Hypertrophy

Interventricular Septal Defect With Dextroposition Of Aorta, Pulmonary Stenosis And Hypertrophy Of Right Ventricle

Interventricular Septal Defect, In Tetralogy Of Fallot

Ventricular Septal Defect With Obstructed Right Ventricular Outflow

Tof - [Tetralogy Of Fallot]

Pulmonary Atresia With Ventricular Septal Defect [Fallot Type]

Pulmonary Atresia, Ventricular Septal Defect And Mapcas

Pulmonary Atresia With Ventricular Septal Defect And Systemic-To-Pulmonary Collateral Arteries [Fallot Type]

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

Chromosome 5p13 Duplication Syndrome

5p13 Microduplication Syndrome

Trisomy 5p13

Dup(5)(P13)

Plagiocephaly

Asymmetric Head

Lateral Curvatures Of Skull Unequal

Unicoronal Synostosis

Diaphragmatic Hernia, Congenital

Congenital Diaphragmatic Hernia

Diaphragmatic Hernia

Cdh

Congenital Diaphragmatic Defect

Hernia, Diaphragmatic

Dih

Hernia, Congenital Diaphragmatic

Hcd

Diaphragmatic Defect, Congenital

Diaphragm, Unilateral Agenesis Of

Hemidiaphragm, Agenesis Of

Diaphragmatic Hernia 1

Agenesis Of Hemidiaphragm

Unilateral Agenesis Of Diaphragm

Hernia Diaphragmatic

Hernia Diaphragmatic Congenital

Hernia, Diaphragmatic, Type 1

Hiatus Hernia

Oesophageal Hiatus Hernia

Paraoesophageal Hernia

Sliding Hiatus Hernia

Congenital Diaphragm Hernia

Congenital Diaphragm Defect With Hernia

Gross Congenital Diaphragm Defect

Vesicoureteral Reflux

Vesico-Ureteral Reflux

Cryptorchidism, Unilateral Or Bilateral

Cryptorchidism

Undescended Testicle

Undescended Testis

Cryptorchism

Undescended Testicles

CRYPTO

Impaired Testicular Descent

Cryptosporidiosis

Retained Testis

Unilateral Cryptorchidism

Unilateral Undescended Testis

Nondescent Unilateral Testicle

Unilateral Cryptorchism

Ectopic Testis, Unilateral

Bilateral Cryptorchidism

Bilateral Cryptorchism

Bilateral Nondescent Testicle

Bilateral Undescended Testes

Bilateral Ectopic Testes

Brachydactyly
Global Developmental Delay, Absent Or Hypoplastic Corpus Callosum, And Dysmorphic Facies

GDACCF

Developmental Disabilities

Familial Isolated Trichomegaly

Long Eyelashes

Tcmgly

Cornelia De Lange Syndrome 2

CDLS2

Cornelia De Lange Syndrome, X-Linked

Cdls, X-Linked

Cornelia De Lange Syndrome X-Linked

Cornelia De Lange Syndrome, Type 2

Congenital Muscular Hypertrophy-Cerebral Syndrome

Roberts-Sc Phocomelia Syndrome

Roberts Syndrome

Sc Phocomelia Syndrome

RBS

Long Bone Deficiencies Associated With Cleft Lip-Palate

Sc Pseudothalidomide Syndrome

Appelt-Gerken-Lenz Syndrome

Pseudothalidomide Syndrome

Tetraphocomelia-Cleft Palate Syndrome

Hypomelia Hypotrichosis Facial Hemangioma Syndrome

Roberts Syndrome/Sc Phocomelia

Roberts Tetraphocomelia Syndrome

Sc Syndrome

Sc Phocomelia

Sc Disease

Sc

Hemoglobin Sc Disease

Cornelia De Lange Syndrome 3 With Or Without Midline Brain Defects

Cornelia De Lange Syndrome 3

CDLS3

Cornelia De Lange Syndrome, Type 3

Spinocerebellar Ataxia 44

SCA44

Partial Trisomy Distal 4q

Distal Trisomy 4q

Chromosome 4, Partial Trisomy 4q

Distal 4q Trisomy

Dup Syndrome, Partial

Duplication 4q Syndrome, Partial

Partial Trisomy 4q Syndrome

Distal Duplication 4q

Telomeric Duplication 4q

Trisomy 4qter

Cornelia De Lange Syndrome 4 With Or Without Midline Brain Defects

Cornelia De Lange Syndrome 4

CDLS4

Cornelia De Lange Syndrome, Type 4

Chronic Atrial And Intestinal Dysrhythmia

CAID

Caid Syndrome

Cohesinopathy Affecting Heart And Gut Rhythm

Chronic Atrial Intestinal Dysrhythmia Syndrome

Chronic Atrial And Intestinal Dysrhythmia Syndrome

Chronic Atrial Dysrhythmia-Intestinal Motility Disorder

Dysrhythmia, Atrial And Intestinal, Chronic

Severe Congenital Neutropenia 2

Scn2

Eyelid Disease

Eyelid Diseases

Eyelid Disorders

Kbg Syndrome

KBGS

Macrodontia, Mental Retardation, Characteristic Facies, Short Stature, And Skeletal Anomalies

Short Stature, Characteristic Facies, Macrodontia, Intellectual Disability, And Skeletal Anomalies

Short Stature, Characteristic Facies, Macrodontia, Mental Retardation, And Skeletal Anomalies

Short Stature-Characteristic Facies-Mental Retardation-Macrodontia-Skeletal Anomalies Syndrome

Short Stature-Facial And Skeletal Anomalies-Intellectual Disability-Macrodontia Syndrome

Warsaw Breakage Syndrome

WABS

WBRS

Non-Syndromic X-Linked Intellectual Disability 107

Mrx107

X-Linked Mental Retardation 107

Diaphragm Disease

Abnormality Of The Diaphragm

Disease Of Diaphragm

Diaphragmatic Disorder

Disorder Of Diaphragm

Linear Skin Defects With Multiple Congenital Anomalies 1

Midas Syndrome

Mcops7

Mls Syndrome

Microphthalmia, Syndromic 7

Microphthalmia With Linear Skin Defects Syndrome

Microphthalmia With Linear Skin Defects

Microphthalmia-Dermal Aplasia-Sclerocornea Syndrome

Syndromic Microphthalmia Type 7

LSDMCA1

Mls

Microphthalmia, Dermal Aplasia, And Sclerocornea

Microphthalmia With Linear Skin Defect Syndrome

Syndromic Microphthalmia 7

Linear Skin Defects With Multiple Congenital Anomalies

Microphthalmia, Dermal Aplasia, Sclerocornea Syndrome

Microphthalmia Dermal Aplasia And Sclerocornea Syndrome

Micropthalmia Syndromic 7

Microphthalmia Syndromic 7

Microphthalmia With Linear Skin Lesions Syndrome

Syndromic Microphthalmia-7

Microphthalmia, Dermal Aplasia And Sclerocornea

Microphthalmia, Syndromic, 7

Midas

Chromosome 16p13.3 Deletion Syndrome, Proximal

Rubinstein-Taybi Syndrome

Broad Thumb-Hallux Syndrome

Chromosome 16p13.3 Deletion Syndrome

Rubinstein-Taybi Syndrome Due To 16p13.3 Microdeletion

Rubinstein Syndrome

Broad Thumbs-Halluces Syndrome

Rsts

Rubinstein-Taybi Deletion Syndrome

Rsts Deletion Syndrome

Proximal Chromosome 16p13.3 Deletion Syndrome

16p13.3 Deletion Syndrome

Broad Thumbs And Great Toes, Characteristic Facies, And Intellectual Disability

Rts

Glass Syndrome

Chromosome 2q32-Q33 Deletion Syndrome

Satb2-Associated Syndrome

2q33.1 Microdeletion Syndrome

Sas

2q32-Q33 Microdeletion Syndrome

2q32q33 Microdeletion Syndrome

Monosomy 2q32

Monosomy 2q32-Q33

Monosomy 2q32q33

2q32 Deletion Syndrome

Del(2)(Q32)

Del(2)(Q32q33)

GLASS

2q32q33 Microdeletion Syndromes

Satb2 Syndrome

Satb2-Associated Syndrome Due To A Chromosomal Rearrangement

Del(2)(Q33.1)

Monosomy 2q33.1

Satb2-Associated Syndrome Due To A Pathogenic Variant

Satb2-Associated Syndrome Due To A Point Mutation

Satb2 Associated Disorder

Autosomal Dominant Intellectual Developmental Disorder 31

Autosomal Dominant Non-Syndromic Intellectual Disability 31

Autosomal Dominant Mental Retardation 31

Mrd31

Noonan Syndrome 1

Noonan Syndrome

NS1

Male Turner Syndrome

Female Pseudo-Turner Syndrome

Turner Phenotype With Normal Karyotype

Noonan Syndrome With Pigmented Villonodular Synovitis

Turner'S Phenotype, Karyotype Normal

Familial Turner Syndrome

Noonan'S Syndrome

Noonan-Ehmke Syndrome

Ns

Pseudo-Ullrich-Turner Syndrome

Turner Syndrome In Female With X Chromosome

Turner-Like Syndrome

Ullrich-Noonan Syndrome

Noonan-Like/Multiple Giant Cell Lesion Syndrome

Noonan Syndrome-Like Disorder With Multiple Giant Cell Lesions

Pterygium Colli Syndrome

Noonan Syndrome, Type 1

Turner Syndrome, Male

Bjornstad Syndrome

BJS

Pili Torti And Nerve Deafness

Ptd

Pili Torti-Deafness Syndrome

Deafness-Pili Torti-Hypogonadism Syndrome

Deafness And Pili Torti, Bjornstad Type

Pili Torti-Sensorineural Hearing Loss

Björnstad Syndrome

Ptnd

Hearing Loss-Pili Torti-Hypogonadism Syndrome

Bjoernstad Syndrome

Trichorhinophalangeal Syndrome, Type Ii

Langer-Giedion Syndrome

Lgs

Trichorhinophalangeal Syndrome Type Ii

Trichorhinophalangeal Syndrome Type 2

TRPS2

Monosomy 8q24.1

Chromosome 8q24.1 Deletion Syndrome

Deletion 8q24.1

Giedion-Langer Syndrome

Trichorhinophalangeal Dysplasia Type Ii

Langer Giedion Syndrome

Trps 2

Tricho-Rhino-Phalangeal Syndrome Type Ii

Trichorhinophalangeal Syndrome With Exostosis

Trps Ii

Tricho-Rhino-Phalangeal Syndrome 2

8q24.1 Microdeletion Syndrome

8q24.1 Deletion Syndrome

Diaphragmatic Eventration
Autosomal Dominant Intellectual Developmental Disorder

Autosomal Dominant Mental Retardation

Autosomal Dominant Non-Syndromic Mental Retardation

Autosomal Dominant Non-Syndromic Intellectual Disability

Mental Retardation, Autosomal Dominant

Hypertrichosis
Atrial Heart Septal Defect

Atrial Septal Defect

Atrial Septal Defects

Atrioseptal Defect

Auricular Septal Defect

Congenital Atrial Septal Defect

Interatrial Septal Defect

Interauricular Septal Defect

Heart Septal Defects, Atrial

Septal Defect, Atrial

Orofacial Cleft

Cleft, Orofacial

Chromosome 2q35 Duplication Syndrome

Syndactyly

Syndactyly Type 1

Sdty1

Zygodactyly

Syndactyly, Type I

Sd1

Syndactyly, Type 1, With Or Without Craniosynostosis

Symphalangism

Non-Syndromic Syndactyly

Symphalangy

Webbing Of Digits

Syndactyly, Type 1

Congenital Nervous System Abnormality

Congenital Neurologic Anomaly

Congenital Nervous System Disorder

Alpha-Thalassemia

Alpha Thalassemia

Alpha Thalassaemia

Alpha Plus Thalassemia

Thalassemia, Alpha-

Thalassemias, Alpha-

A-Thalassemia

Α-Thalassemia

A-THAL

Thalassemia

Alpha Thalassaemia Syndrome

Rasopathy

Ras/Mitogen-Activated Protein Kinase Syndrome

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus NIPBL MGD MGI:1913976
Rattus norvegicus NIPBL RGD RGD:1306393
Canis familiaris NIPBL VGNC VGNC:43819
Macaca mulatta NIPBL VGNC VGNC:75271
Felis catus NIPBL VGNC VGNC:63810
Bos taurus NIPBL VGNC VGNC:32085