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  2. Cdk5 - cyclin-dependent kinase 5 Gene

Cdk5 - cyclin-dependent kinase 5 Gene

中文名称:细胞周期蛋白依赖性激酶 5

种属: Rattus norvegicus

基因 ID: 140908 | 基因类型: protein coding

关于 Cdk5

Primary_assembly 4: 10,754,687-10,760,112 forward strand.mRatBN7.2:CM026977.1

This gene has 2 transcripts (splice variants), 170 orthologues, 24 paralogues and is associated with 16 phenotypes. Biased expression in Brain (RPKM 242.9), Adrenal (RPKM 12.7) and 9 other tissues.

功能概要

该基因编码的蛋白可启动多种功能,包括肝配蛋白受体结合活性;蛋白激酶活性;电压门控钙通道活动参与突触前细胞溶质钙水平的正调节。参与多个过程,包括对淀粉样蛋白-β 的细胞反应;凋亡过程的正调控;和蛋白质磷酸化。作用于蛋白质磷酸化的上游或内部。位于多个细胞成分中,包括生长锥;神经细胞体;和突触后密度。蛋白激酶 5 复合体的一部分。活跃于多种细胞成分,包括 Schaffer 侧支 - CA1 突触;谷氨酸能突触;和神经肌肉接头。与微管共定位。用于研究脑缺血;精神抑郁症;和三叉神经痛。阿尔茨海默病的生物标志物;短暂性脑缺血;和血管性痴呆。该基因的人类直系同源物与阿尔茨海默氏病和伴有小脑发育不全的无脑畸形 7 有关。与人 CDK5(细胞周期蛋白依赖性激酶 5)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables several functions, including Ephrin Receptor binding activity; protein kinase activity; and voltage-gated Calcium Channel activity involved in positive regulation of presynaptic cytosolic calcium levels. Involved in several processes, including cellular response to amyloid-beta; positive regulation of apoptotic process; and protein phosphorylation. Acts upstream of or within protein phosphorylation. Located in several cellular components, including growth cone; neuronal cell body; and postsynaptic density. Part of protein kinase 5 complex. Is active in several cellular components, including Schaffer collateral - CA1 synapse; glutamatergic synapse; and neuromuscular junction. Colocalizes with microtubule. Used to study brain ischemia; mental depression; and trigeminal neuralgia. Biomarker of Alzheimer's disease; transient cerebral ischemia; and vascular dementia. Human ortholog(s) of this gene implicated in Alzheimer's disease and lissencephaly 7 with cerebellar hypoplasia. Orthologous to human CDK5 (cyclin dependent kinase 5). [provided by Alliance of Genome Resources, Apr 2022]

Cdk5 基因产物(1)

mRNA Protein Name
NM_080885.2 NP_543161.1 cyclin-dependent kinase 5
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables cyclin-dependent protein serine/threonine kinase activity IDA
IDA: 通过直接分析推断
11675505 RGD
enables cytoskeletal protein binding IPI
IPI: 通过物理相互作用推断
9313898 RGD
enables ephrin receptor binding IPI
IPI: 通过物理相互作用推断
17143272 RGD
enables histone kinase activity IDA
IDA: 通过直接分析推断
16407116 RGD
enables kinase activity IDA
IDA: 通过直接分析推断
8846918 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
8846918 RGD
enables protein kinase activity IDA
IDA: 通过直接分析推断
12084709 RGD
enables protein kinase binding IPI
IPI: 通过物理相互作用推断
19700222 RGD
enables protein serine/threonine kinase activity IDA
IDA: 通过直接分析推断
8662984 RGD
enables tau-protein kinase activity IDA
IDA: 通过直接分析推断
15994305 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in DNA damage response IMP
IMP: 通过突变表型推断
19151707 RGD
involved in cellular response to amyloid-beta IDA
IDA: 通过直接分析推断
26224839 RGD
involved in cortical actin cytoskeleton organization IMP
IMP: 通过突变表型推断
15331630 RGD
involved in exocytosis IMP
IMP: 通过突变表型推断
15331630 RGD
involved in mitochondrion organization IMP
IMP: 通过突变表型推断
28153522 RGD
involved in neuron apoptotic process IMP
IMP: 通过突变表型推断
15592431 RGD
involved in neuron differentiation IDA
IDA: 通过直接分析推断
8846918 RGD
involved in neuron projection development IMP
IMP: 通过突变表型推断
8846918 RGD
involved in neuron projection morphogenesis IMP
IMP: 通过突变表型推断
12535933 RGD
involved in nucleocytoplasmic transport IMP
IMP: 通过突变表型推断
16887799 RGD
involved in peptidyl-serine phosphorylation IDA
IDA: 通过直接分析推断
12691662 RGD
involved in positive regulation of glial cell apoptotic process IMP
IMP: 通过突变表型推断
28153522 RGD
involved in positive regulation of neuron apoptotic process IDA
IDA: 通过直接分析推断
16192386 RGD
involved in positive regulation of presynaptic cytosolic calcium concentration IMP
IMP: 通过突变表型推断
23699505 RGD
involved in positive regulation of protein phosphorylation IMP
IMP: 通过突变表型推断
28153522 RGD
involved in positive regulation of voltage-gated calcium channel activity IMP
IMP: 通过突变表型推断
23699505 RGD
involved in protein autophosphorylation IDA
IDA: 通过直接分析推断
15992363 RGD
acts upstream of or within protein phosphorylation IDA
IDA: 通过直接分析推断
17202132 RGD
involved in protein phosphorylation IDA
IDA: 通过直接分析推断
8662984 RGD
involved in regulated exocytosis IMP
IMP: 通过突变表型推断
15331630 RGD
involved in regulation of presynaptic cytosolic calcium ion concentration IDA
IDA: 通过直接分析推断
23699505 RGD
involved in regulation of presynaptic cytosolic calcium ion concentration IMP
IMP: 通过突变表型推断
23699505 RGD
involved in regulation of synapse pruning EXP
EXP: 通过实验结果推断
17143272 RGD
involved in regulation of synapse pruning IDA
IDA: 通过直接分析推断
17143272 RGD
involved in regulation of synapse pruning IMP
IMP: 通过突变表型推断
17143272 RGD
involved in regulation of synaptic plasticity IMP
IMP: 通过突变表型推断
11675505 RGD
involved in skeletal muscle tissue development IEP
IEP: 通过表达模式推断
15208659 RGD
involved in synaptic vesicle endocytosis IMP
IMP: 通过突变表型推断
12855954 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
is active in Schaffer collateral - CA1 synapse EXP
EXP: 通过实验结果推断
17143272 RGD
is active in Schaffer collateral - CA1 synapse IDA
IDA: 通过直接分析推断
17143272 RGD
is active in Schaffer collateral - CA1 synapse IMP
IMP: 通过突变表型推断
17143272 RGD
located in axon IDA
IDA: 通过直接分析推断
8846918 RGD
located in cytoplasm IDA
IDA: 通过直接分析推断
10683146 RGD
located in dendrite IDA
IDA: 通过直接分析推断
8846918 RGD
is active in glutamatergic synapse EXP
EXP: 通过实验结果推断
17143272 RGD
is active in glutamatergic synapse IDA
IDA: 通过直接分析推断
17143272 RGD
is active in glutamatergic synapse IMP
IMP: 通过突变表型推断
17143272 RGD
located in growth cone IDA
IDA: 通过直接分析推断
8846918 RGD
located in membrane IDA
IDA: 通过直接分析推断
10683146 RGD
located in microtubule IDA
IDA: 通过直接分析推断
17491008 RGD
is active in neuromuscular junction IDA
IDA: 通过直接分析推断
11276227 RGD
located in neuromuscular junction IDA
IDA: 通过直接分析推断
11276227 RGD
located in neuron projection IDA
IDA: 通过直接分析推断
10683146 RGD
located in neuronal cell body IDA
IDA: 通过直接分析推断
8846918 RGD
located in nucleus IDA
IDA: 通过直接分析推断
16192386 RGD
is active in postsynapse IDA
IDA: 通过直接分析推断
11276227 RGD
located in postsynaptic density IDA
IDA: 通过直接分析推断
17143272 RGD
located in presynapse IMP
IMP: 通过突变表型推断
23699505 RGD
part of protein kinase 5 complex IDA
IDA: 通过直接分析推断
8662984 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Cdk5 蛋白结构

STKc_CDK5

STKc_CDK5: cd07839 (2 - 285)

  • 0
  • 100
  • 200
  • 292 a.a.
蛋白主名 其他名称

cyclin-dependent kinase 5

TPKII catalytic subunit

cell division protein kinase 5

cyclin-dependent-like kinase 5

serine/threonine-protein kinase PSSALRE

tau protein kinase II catalytic subunit

Cdk5 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
Cdk5 Q03114 Cdk5r1 Rattus norvegicus P61810 17341134
种属间
Cdk5 Q03114 NTRK2 Homo sapiens Q16620 17341134
种属间
Cdk5 Q03114 NTRK2 Homo sapiens Q16620 17341134
种属内
Cdk5 Q03114 Ntrk2 Rattus norvegicus Q63604 17341134
种属内
Cdk5 Q03114 Ntrk2 Rattus norvegicus Q63604 17341134
种属内
Cdk5 Q03114 Ntrk3 Rattus norvegicus Q03351 17341134
种属内
Cdk5 Q03114 Ntrk3 Rattus norvegicus Q03351 17341134
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Cdk5 NCBI NCBI:1020