1. Gene
  2. Scn9a - sodium channel, voltage-gated, type IX, alpha Gene

Scn9a - sodium channel, voltage-gated, type IX, alpha Gene

中文名称:钠通道,电压门控, IX 型, α

种属: Mus musculus

同用名: PN1; Nav1.7; mKIAA4197

基因 ID: 20274 | 基因类型: protein coding

关于 Scn9a

Chromosome 2: 66,310,424-66,465,306 reverse strand.GRCm39:CM000995.3

This gene has 7 transcripts (splice variants), 111 orthologues, 26 paralogues and is associated with 19 phenotypes. Biased expression in CNS E18 (RPKM 4.9), whole brain E14.5 (RPKM 3.) and 6 other tissues.

功能概要

预测该基因编码的蛋白可启动钠离子结合活性和电压门控钠通道活性。在几个过程的上游或内部起作用,包括对疼痛的行为反应;炎症反应;和对有毒物质的反应。预计是质膜的组成部分。预计是电压门控钠通道复合体的一部分。预计在轴突中活跃。以多种结构表达,包括消化系统;脑;免疫系统;雄性生殖腺或器官;和呼吸系统上皮。该基因的人类直系同源物与红斑性肢痛有关;全身性癫痫伴热性惊厥加 7;和阵发性极度疼痛障碍。与人类 SCN9A(钠电压门控通道 α 亚基 9)同源。 [由基因组资源联盟提供,2022 年 4 月]

Predicted to enable sodium ion binding activity and voltage-gated Sodium Channel activity. Acts upstream of or within several processes, including behavioral response to pain; inflammatory response; and response to toxic substance. Predicted to be integral component of plasma membrane. Predicted to be part of voltage-gated Sodium Channel complex. Predicted to be active in axon. Is expressed in several structures, including alimentary system; brain; immune system; male reproductive gland or organ; and respiratory system epithelium. Human ortholog(s) of this gene implicated in erythromelalgia; generalized epilepsy with febrile seizures plus 7; and paroxysmal extreme pain disorder. Orthologous to human SCN9A (sodium voltage-gated channel alpha subunit 9). [provided by Alliance of Genome Resources, Apr 2022]

Scn9a 基因产物(2)

mRNA Protein Name
NM_001290674.1 NP_001277603.1 sodium channel protein type 9 subunit alpha isoform a
NM_001290675.1 NP_001277604.1 sodium channel protein type 9 subunit alpha isoform b
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
37117223 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of or within behavioral response to pain IMP
IMP: 通过突变表型推断
15314237 MGI
involved in behavioral response to pain IMP
IMP: 通过突变表型推断
24440715 MGI
involved in circadian rhythm IMP
IMP: 通过突变表型推断
25101983 MGI
involved in detection of mechanical stimulus involved in sensory perception IMP
IMP: 通过突变表型推断
25101983 MGI
involved in detection of temperature stimulus involved in sensory perception of pain IMP
IMP: 通过突变表型推断
25101983 MGI
acts upstream of or within inflammatory response IMP
IMP: 通过突变表型推断
15314237 MGI
acts upstream of or within post-embryonic development IMP
IMP: 通过突变表型推断
15314237 MGI
acts upstream of or within response to toxic substance IDA
IDA: 通过直接分析推断
16029194 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Scn9a 蛋白结构

Ion_trans

Ion_trans: pfam00520 (124 - 409)

Na_trans_cytopl

Na_trans_cytopl: pfam11933 (533 - 692)

Ion_trans

Ion_trans: pfam00520 (741 - 954)

Na_trans_assoc

Na_trans_assoc: pfam06512 (980 - 1184)

Ion_trans

Ion_trans: pfam00520 (1188 - 1463)

Na_channel_gate

Na_channel_gate: cd13433 (1455 - 1507)

Ion_trans

Ion_trans: pfam00520 (1511 - 1767)

  • 0
  • 400
  • 800
  • 1200
  • 1600
  • 1984 a.a.
蛋白主名 其他名称

sodium channel protein type 9 subunit alpha

peripheral sodium channel 1

sodium channel 25

sodium channel, voltage-gated, type IX, alpha polypeptide

voltage-gated sodium channel alpha subunit Nav1.7

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Scn9a NCBI NCBI:6335