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  2. Hdac1 - histone deacetylase 1 Gene

Hdac1 - histone deacetylase 1 Gene

中文名称:组蛋白脱乙酰酶 1

种属: Mus musculus

同用名: HD1; RPD3; MommeD5; Hdac1-ps

基因 ID: 433759 | 基因类型: protein coding

关于 Hdac1

Chromosome 4: 129,409,897-129,436,506 reverse strand.GRCm39:CM000997.3

This gene has 7 transcripts (splice variants), 277 orthologues, 10 paralogues and is associated with 31 phenotypes. Ubiquitous expression in CNS E11.5 (RPKM 54.8), placenta adult (RPKM 51.1) and 28 other tissues.

功能概要

该基因编码的蛋白可启动多项功能,包括电子邮箱绑定活动; Krueppel 相关框域绑定活动;和启动子特异性染色质结合活性。参与多个过程,包括动物器官发育;组蛋白去乙酰化;和基因表达的调控。作用于多个过程的上游或内部,包括信号转导的负调节; RNA 聚合酶 II 对转录的负调控;和神经系统发育。位于异染色质;神经细胞体;和核。 NuRD 复合体和转录抑制复合体的一部分。以多种结构表达,包括大脑;早孕;胚胎间充质;泌尿生殖系统;和感觉器官。与人类 HDAC1(组蛋白脱乙酰酶 1)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables several functions, including E-box binding activity; Krueppel-associated box domain binding activity; and promoter-specific chromatin binding activity. Involved in several processes, including animal organ development; histone deacetylation; and regulation of gene expression. Acts upstream of or within several processes, including negative regulation of signal transduction; negative regulation of transcription by RNA polymerase II; and nervous system development. Located in heterochromatin; neuronal cell body; and nucleus. Part of NuRD complex and transcription repressor complex. Is expressed in several structures, including brain; early conceptus; embryo mesenchyme; genitourinary system; and sensory organ. Orthologous to human HDAC1 (histone deacetylase 1). [provided by Alliance of Genome Resources, Apr 2022]

Hdac1 基因产物(1)

mRNA Protein Name
NM_008228.3 NP_032254.1 histone deacetylase 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA binding IDA
IDA: 通过直接分析推断
14593184 MGI
enables DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
18486321 MGI
enables E-box binding IDA
IDA: 通过直接分析推断
24736997 MGI
enables Krueppel-associated box domain binding IPI
IPI: 通过物理相互作用推断
21177534 MGI
enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
19235719 MGI
enables chromatin binding IDA
IDA: 通过直接分析推断
15608638 MGI
enables histone deacetylase activity IDA
IDA: 通过直接分析推断
10615135 MGI
enables histone decrotonylase activity IDA
IDA: 通过直接分析推断
30279482 MGI
enables promoter-specific chromatin binding IDA
IDA: 通过直接分析推断
22770845 MGI
enables protein binding IPI
IPI: 通过物理相互作用推断
8917507 MGI
enables transcription cis-regulatory region binding IDA
IDA: 通过直接分析推断
24413057 MGI
enables transcription corepressor activity IDA
IDA: 通过直接分析推断
8917507 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in circadian regulation of gene expression IDA
IDA: 通过直接分析推断
15226430 MGI
involved in circadian rhythm IDA
IDA: 通过直接分析推断
24736997 MGI
involved in embryonic digit morphogenesis IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of or within endoderm development IDA
IDA: 通过直接分析推断
15060137 MGI
acts upstream of or within endoderm development IMP
IMP: 通过突变表型推断
15060137 MGI
involved in epidermal cell differentiation IGI
IGI: 通过遗传相互作用推断
21093383 MGI
involved in eyelid development in camera-type eye IGI
IGI: 通过遗传相互作用推断
21093383 MGI
involved in fungiform papilla formation IGI
IGI: 通过遗传相互作用推断
21093383 MGI
involved in hair follicle placode formation IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of or within hippocampus development IGI
IGI: 通过遗传相互作用推断
19380719 MGI
acts upstream of or within negative regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
9271381 MGI
involved in negative regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
21960634 MGI
involved in negative regulation of apoptotic process IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of or within negative regulation of canonical NF-kappaB signal transduction IGI
IGI: 通过遗传相互作用推断
19805123 MGI
acts upstream of or within negative regulation of canonical Wnt signaling pathway IGI
IGI: 通过遗传相互作用推断
19503085 MGI
acts upstream of or within negative regulation of intrinsic apoptotic signaling pathway IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of or within negative regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
8917507 MGI
involved in negative regulation of transcription by RNA polymerase II IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of or within neuron differentiation IGI
IGI: 通过遗传相互作用推断
19380719 MGI
involved in odontogenesis of dentin-containing tooth IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of oligodendrocyte differentiation IGI
IGI: 通过遗传相互作用推断
19503085 MGI
involved in positive regulation of cell population proliferation IGI
IGI: 通过遗传相互作用推断
21093383 MGI
acts upstream of or within positive regulation of oligodendrocyte differentiation IGI
IGI: 通过遗传相互作用推断
19503085 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of NuRD complex IDA
IDA: 通过直接分析推断
11836251 MGI
part of NuRD complex IPI
IPI: 通过物理相互作用推断
14645126 MGI
located in chromatin IDA
IDA: 通过直接分析推断
21093383 MGI
located in heterochromatin IDA
IDA: 通过直接分析推断
14519686 MGI
part of histone deacetylase complex IPI
IPI: 通过物理相互作用推断
14645126 MGI
located in neuronal cell body IDA
IDA: 通过直接分析推断
18651664 MGI
located in nucleus IDA
IDA: 通过直接分析推断
11115394 MGI
part of protein-containing complex IDA
IDA: 通过直接分析推断
19796622 MGI
part of transcription regulator complex IDA
IDA: 通过直接分析推断
17707228 MGI
part of transcription regulator complex IPI
IPI: 通过物理相互作用推断
17182846 MGI
part of transcription repressor complex IPI
IPI: 通过物理相互作用推断
17182846 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Hdac1 蛋白结构

HDAC1

HDAC1: cd10010 (3 - 373)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 482 a.a.
蛋白主名 其他名称

histone deacetylase 1

protein deacetylase HDAC1

protein decrotonylase HDAC1

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Hdac1 NCBI NCBI:3065